Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RPL10A ENSPTRG00000018085

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Description

ribosomal protein L10a [Source:VGNC Symbol;Acc:VGNC:3687]

Location

Chromosome 6: 35,800,809-35,804,203 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 3 transcripts (splice variants), 175 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000033432.3	RPL10A-202	764	217aa	ENSPTRP00000030891.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y0B4 H2QSV7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000081366.1	RPL10A-203	654	217aa	ENSPTRP00000071516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S3D5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000081451.1	RPL10A-201	651	216aa	ENSPTRP00000062201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RC32	-

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Summary

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