Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RBM27 ENSPTRG00000017373

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Description

RNA binding motif protein 27 [Source:UniProtKB Gene Name;Acc:A0A2I3SKJ1]

Location

Chromosome 5: 146,356,102-146,440,717 forward strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 4 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000032143.5	RBM27-201	6596	1060aa	ENSPTRP00000029695.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y1D0 H2QRQ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000086946.1	RBM27-202	6431	1005aa	ENSPTRP00000061724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RB96	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000092016.1	RBM27-203	3180	1059aa	ENSPTRP00000077499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKJ1	-
ENSPTRT00000100330.1	RBM27-204	3162	1053aa	ENSPTRP00000085433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8B8	-

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Summary

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