Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTCD2 ENSPTRG00000016968

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Description

pentatricopeptide repeat domain 2 [Source:VGNC Symbol;Acc:VGNC:4138]

Location

Chromosome 5: 43,527,933-43,566,509 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 4 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000031471.6	PTCD2-202	1957	388aa	ENSPTRP00000029067.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QR19	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000083822.1	PTCD2-201	1894	93aa	ENSPTRP00000070337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S065	-
ENSPTRT00000082133.1	PTCD2-204	840	279aa	ENSPTRP00000071776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S4L3	-
ENSPTRT00000087221.1	PTCD2-203	651	216aa	ENSPTRP00000069203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RX54 A0A6D2Y2F1	-

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Summary

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