Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC1A3 ENSPTRG00000016800

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Description

solute carrier family 1 member 3 [Source:VGNC Symbol;Acc:VGNC:8638]

Location

Chromosome 5: 77,616,073-77,698,255 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 6 transcripts (splice variants), 266 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000078486.1	SLC1A3-201	4419	542aa	ENSPTRP00000082710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T0G3 A0A6D2WD61	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000031187.3	SLC1A3-202	4033	497aa	ENSPTRP00000028807.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XK99 H2QQS3	-
ENSPTRT00000085288.1	SLC1A3-203	1614	537aa	ENSPTRP00000083100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T1J2	-
ENSPTRT00000080433.1	SLC1A3-204	1491	496aa	ENSPTRP00000071836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S4T1	-
ENSPTRT00000087445.1	SLC1A3-205	1293	430aa	ENSPTRP00000081478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWX4 A0A6D2Y0H7	-
ENSPTRT00000097894.1	SLC1A3-206	1125	374aa	ENSPTRP00000068717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RVH7	-

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Summary

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