Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP2B2 ENSPTRG00000014620

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Description

ATPase plasma membrane Ca2+ transporting 2 [Source:VGNC Symbol;Acc:VGNC:11332]

Location

Chromosome 3: 10,594,556-10,741,863 reverse strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 7 transcripts (splice variants), 438 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000092506.1	ATP2B2-202	8930	1243aa	ENSPTRP00000086677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8M194 A0A6D2YA82	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000108185.1	ATP2B2-201	8383	1198aa	ENSPTRP00000076164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8M1A2 A0A6D2XCH0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000043226.4	ATP2B2-203	3732	1243aa	ENSPTRP00000046389.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R410	-
ENSPTRT00000110663.1	ATP2B2-206	3684	1227aa	ENSPTRP00000071232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2L4	-
ENSPTRT00000089824.1	ATP2B2-204	3627	1208aa	ENSPTRP00000086807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TC38	-
ENSPTRT00000107726.1	ATP2B2-205	3465	1154aa	ENSPTRP00000079184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8M196 A0A6D2Y013	-
ENSPTRT00000086788.1	ATP2B2-207	1815	604aa	ENSPTRP00000070929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2W1	-

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Summary

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