Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: APOBEC3H ENSPTRG00000014390

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Description

apolipoprotein B mRNA editing enzyme catalytic subunit 3H [Source:VGNC Symbol;Acc:VGNC:6685]

Location

Chromosome 22: 25,672,631-25,679,614 forward strand.

Pan_tro_3.0:CM000335.3

About this gene

This gene has 3 transcripts (splice variants), 91 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000077088.1	APOBEC3H-203	603	200aa	ENSPTRP00000083401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T2F3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000026890.5	APOBEC3H-201	1284	183aa	ENSPTRP00000024788.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7T0U6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000099825.1	APOBEC3H-202	465	154aa	ENSPTRP00000078638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SNY2	-

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Summary

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