Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SGSM1 ENSPTRG00000014181

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Description

small G protein signaling modulator 1 [Source:VGNC Symbol;Acc:VGNC:6014]

Location

Chromosome 22: 11,229,763-11,349,758 forward strand.

Pan_tro_3.0:CM000335.3

About this gene

This gene has 5 transcripts (splice variants), 269 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000078431.1	SGSM1-203	3456	1151aa	ENSPTRP00000083099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T1I0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000065842.3	SGSM1-202	6101	1148aa	ENSPTRP00000057410.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XBV6 H2RCJ4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000104581.1	SGSM1-201	3387	1093aa	ENSPTRP00000067760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RSS9 A0A6D2XRH8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000099639.1	SGSM1-204	3273	1090aa	ENSPTRP00000082386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SZG9	-
ENSPTRT00000093259.1	SGSM1-205	3258	1085aa	ENSPTRP00000092073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TS64	-

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Summary

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