Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ASXL1 ENSPTRG00000013377

.

Description

ASXL transcriptional regulator 1 [Source:VGNC Symbol;Acc:VGNC:6045]

Location

Chromosome 20: 33,720,068-33,798,472 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 5 transcripts (splice variants), 223 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000107520.1	ASXL1-203	4647	1548aa	ENSPTRP00000071060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S241	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000078973.1	ASXL1-201	4626	1541aa	ENSPTRP00000067613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PYW9 A0A6D2XGJ5	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000110648.1	ASXL1-202	4611	1536aa	ENSPTRP00000073165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S802 A0A6D2Y9S5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000043057.4	ASXL1-204	4587	1528aa	ENSPTRP00000045248.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R3B7	-
ENSPTRT00000106787.1	ASXL1-205	174	57aa	ENSPTRP00000088127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TFT8 A0A6D2W7Z9	-

.

Summary

.

.