Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP40 ENSPTRG00000013054

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Description

ubiquitin specific peptidase 40 [Source:VGNC Symbol;Acc:VGNC:3871]

Location

Chromosome 2B: 124,550,415-124,638,841 reverse strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 2 transcripts (splice variants), 188 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000024205.6	USP40-201	3744	1247aa	ENSPTRP00000022327.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VTU8 H2QJN0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000091356.1	USP40-202	297	98aa	ENSPTRP00000093636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TWL5 A0A6D2X4F9	-

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Summary

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