Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LRPPRC ENSPTRG00000011880

.

Description

leucine rich pentatricopeptide repeat containing [Source:VGNC Symbol;Acc:VGNC:320]

Location

Chromosome 2A: 44,883,929-44,991,820 reverse strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 4 transcripts (splice variants) and 151 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000086013.1	LRPPRC-202	5095	1394aa	ENSPTRP00000080675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DAQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000104081.1	LRPPRC-201	4453	50aa	ENSPTRP00000091500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TRC2	-
ENSPTRT00000022106.5	LRPPRC-203	4101	1366aa	ENSPTRP00000020395.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QHU2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000085689.1	LRPPRC-204	1596	531aa	ENSPTRP00000080922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SVD4 A0A6D2VXL3	-

.

Summary

.

.