Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ERCC2 ENSPTRG00000011149

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Description

ERCC excision repair 2, TFIIH core complex helicase subunit [Source:VGNC Symbol;Acc:VGNC:7479]

Location

Chromosome 19: 47,466,900-47,485,869 reverse strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 5 transcripts (splice variants), 199 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000100344.1	ERCC2-201	2332	760aa	ENSPTRP00000079029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y303 G2HHJ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000020720.5	ERCC2-202	2283	760aa	ENSPTRP00000019135.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QGL4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000101743.1	ERCC2-203	2220	739aa	ENSPTRP00000085902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T9J7	-
ENSPTRT00000094760.1	ERCC2-204	2049	682aa	ENSPTRP00000092255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TSP5 A0A6D2XAR6	-
ENSPTRT00000084400.1	ERCC2-205	1218	405aa	ENSPTRP00000067858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RT21 A0A6D2XD90	-

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Summary

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