Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TSEN54 ENSPTRG00000009646

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Description

tRNA splicing endonuclease subunit 54 [Source:VGNC Symbol;Acc:VGNC:9743]

Location

Chromosome 17: 75,062,796-75,071,051 forward strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 3 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000085574.1	TSEN54-203	1584	527aa	ENSPTRP00000061662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RAK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000017690.5	TSEN54-201	1938	526aa	ENSPTRP00000016389.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XSE4 H2QDV6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000077273.1	TSEN54-202	537	178aa	ENSPTRP00000080061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SSS9 A0A6D2VX06	-

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Summary

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