Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: MSI2 ENSPTRG00000009437

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Description

musashi RNA binding protein 2 [Source:VGNC Symbol;Acc:VGNC:51695]

Location

Chromosome 17: 56,520,557-56,950,080 forward strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 4 transcripts (splice variants), 260 orthologues and 64 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000017312.5	MSI2-202	975	324aa	ENSPTRP00000016029.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WEI1 H2QDH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000108358.1	MSI2-203	804	267aa	ENSPTRP00000063479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RFM7 A0A6D2WQ62	-
ENSPTRT00000100798.1	MSI2-201	756	251aa	ENSPTRP00000064460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RJA8 A0A6D2WDR7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000108645.1	MSI2-204	594	197aa	ENSPTRP00000079771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SRX4	-

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Summary

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