Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LUC7L3 ENSPTRG00000009409

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Description

LUC7 like 3 pre-mRNA splicing factor [Source:VGNC Symbol;Acc:VGNC:9363]

Location

Chromosome 17: 49,842,499-49,875,517 forward strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000085511.1	LUC7L3-201	3429	489aa	ENSPTRP00000083997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VSX0 K7DG47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000107010.1	LUC7L3-202	3451	432aa	ENSPTRP00000091271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TPV1 A0A6D2XRD2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000017266.4	LUC7L3-204	1443	480aa	ENSPTRP00000015985.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QDF9	-
ENSPTRT00000076447.1	LUC7L3-203	240	79aa	ENSPTRP00000090330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8MFS3 A0A6D2WQA9	-

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Summary

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