Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMG6 ENSPTRG00000008544

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Description

SMG6 nonsense mediated mRNA decay factor [Source:VGNC Symbol;Acc:VGNC:9636]

Location

Chromosome 17: 2,099,849-2,347,998 reverse strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 2 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000015761.6	SMG6-202	5949	1419aa	ENSPTRP00000014583.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QBV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000083339.1	SMG6-201	3528	511aa	ENSPTRP00000073413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8JKX4 A0A6D2VWQ6	-

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Summary

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