Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RBFOX1 ENSPTRG00000007744

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Description

RNA binding fox-1 homolog 1 [Source:VGNC Symbol;Acc:VGNC:13786]

Location

Chromosome 16: 5,575,044-8,088,868 forward strand.

Pan_tro_3.0:CM000330.3

About this gene

This gene has 8 transcripts (splice variants), 180 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000092732.1	RBFOX1-201	1749	582aa	ENSPTRP00000085111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T7A9 A0A6D2Y3U8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000044226.4	RBFOX1-203	1401	466aa	ENSPTRP00000042877.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WZD8 H2R1U0	-
ENSPTRT00000081332.1	RBFOX1-202	1278	425aa	ENSPTRP00000087958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TFB9 A0A6D2WPT2	-
ENSPTRT00000092745.1	RBFOX1-206	1257	418aa	ENSPTRP00000079720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3ST32 A0A6D2WEL3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000078279.1	RBFOX1-205	1176	391aa	ENSPTRP00000085204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T7I1 A0A6D2XDK1	-
ENSPTRT00000095171.1	RBFOX1-204	1143	380aa	ENSPTRP00000090982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TPX1 A0A6D2VY32	-
ENSPTRT00000096894.1	RBFOX1-208	1140	379aa	ENSPTRP00000088403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TGQ4	-
ENSPTRT00000103269.1	RBFOX1-207	1128	375aa	ENSPTRP00000074112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SC88 A0A6D2VWJ7	-

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Summary

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