Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RPUSD1 ENSPTRG00000007565

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Description

RNA pseudouridine synthase domain containing 1 [Source:VGNC Symbol;Acc:VGNC:5914]

Location

Chromosome 16: 885,327-891,473 reverse strand.

Pan_tro_3.0:CM000330.3

About this gene

This gene has 3 transcripts (splice variants), 199 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000013953.4	RPUSD1-201	2068	312aa	ENSPTRP00000012926.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WMB9 H2QA88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000087405.1	RPUSD1-202	666	221aa	ENSPTRP00000071383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S310	-
ENSPTRT00000083444.1	RPUSD1-203	396	131aa	ENSPTRP00000072605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S6Z0 A0A6D2VSU6	-

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Summary

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