Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: ALKBH1 ENSPTRG00000006586

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Description

alkB homolog 1, histone H2A dioxygenase [Source:VGNC Symbol;Acc:VGNC:7429]

Location

Chromosome 14: 62,254,821-62,290,415 reverse strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 2 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000012081.3	ALKBH1-201	2653	389aa	ENSPTRP00000011188.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2YB41 H2Q8Q0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000082555.1	ALKBH1-202	351	116aa	ENSPTRP00000068989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RWB7 A0A6D2W6B9	-

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Summary

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