Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHTN1 ENSPTRG00000002976

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Description

shootin 1 [Source:VGNC Symbol;Acc:VGNC:5730]

Location

Chromosome 10: 118,635,825-118,756,306 reverse strand.

Pan_tro_3.0:CM000324.3

About this gene

This gene has 4 transcripts (splice variants), 206 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000066305.3	SHTN1-203	1911	636aa	ENSPTRP00000057882.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RCW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000105775.1	SHTN1-201	4025	631aa	ENSPTRP00000070272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XUV5 K7C096	-
ENSPTRT00000094868.1	SHTN1-204	3952	558aa	ENSPTRP00000063141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RET0 A0A6D2VTD1	-
ENSPTRT00000102501.1	SHTN1-202	3628	456aa	ENSPTRP00000092431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TT75 A0A6D2WJH8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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