Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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ID History
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Gene: MRPL9 ENSPTRG00000001295

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Description

mitochondrial ribosomal protein L9 [Source:VGNC Symbol;Acc:VGNC:1331]

Location

Chromosome 1: 129,744,634-129,749,418 reverse strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 2 transcripts (splice variants) and 191 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000002408.4	MRPL9-201	2139	267aa	ENSPTRP00000002210.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XUT6 H2PZZ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000097544.1	MRPL9-202	702	233aa	ENSPTRP00000067286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RRG9 A0A6D2WA77	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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