Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS45 ENSPTRG00000001246

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Description

vacuolar protein sorting 45 homolog [Source:VGNC Symbol;Acc:VGNC:9908]

Location

Chromosome 1: 127,980,382-128,074,901 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 5 transcripts (splice variants), 211 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000109064.1	VPS45-201	1743	580aa	ENSPTRP00000089802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TKP9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000002310.3	VPS45-202	2831	570aa	ENSPTRP00000002113.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2PZW0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000098920.1	VPS45-204	1617	538aa	ENSPTRP00000082030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SYH6	-
ENSPTRT00000110947.1	VPS45-205	1386	461aa	ENSPTRP00000068954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RW80	-
ENSPTRT00000088749.1	VPS45-203	1344	447aa	ENSPTRP00000088635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TH92	-

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Summary

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