Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ATP1A1 ENSPTRG00000001152

.

Description

ATPase Na+/K+ transporting subunit alpha 1 [Source:VGNC Symbol;Acc:VGNC:8029]

Location

Chromosome 1: 119,438,650-119,470,383 reverse strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 6 transcripts (splice variants), 322 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000088135.1	ATP1A1-204	3084	1027aa	ENSPTRP00000090124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TMJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000095387.1	ATP1A1-202	3928	1023aa	ENSPTRP00000090661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TP00 A0A6D2XLE4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000043260.6	ATP1A1-201	3759	1023aa	ENSPTRP00000041092.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WM93 H2R0Q6	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000106067.1	ATP1A1-205	3069	1022aa	ENSPTRP00000064343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RI36	-
ENSPTRT00000083252.1	ATP1A1-203	3063	1020aa	ENSPTRP00000085436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T862	-
ENSPTRT00000077085.1	ATP1A1-206	2826	941aa	ENSPTRP00000063882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RGY2	-

.

Summary

.

.