Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF38B ENSPTRG00000001032

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Description

pre-mRNA processing factor 38B [Source:VGNC Symbol;Acc:VGNC:1472]

Location

Chromosome 1: 109,192,535-109,201,406 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 2 transcripts (splice variants) and 19 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000001944.5	PRPF38B-201	3089	546aa	ENSPTRP00000001785.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X9R8 H2PZJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000103309.1	PRPF38B-202	573	190aa	ENSPTRP00000088348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TGK2 A0A6D2W013	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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