Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: plod1a ENSONIG00000017978

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Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]

Location

Primary_assembly LG20: 35,901,186-35,926,908 reverse strand.

O_niloticus_UMD_NMBU:CM007501.2

About this gene

This gene has 10 transcripts (splice variants), 197 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000039340.1	plod1a-203	2482	731aa	ENSONIP00000030605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669B7X9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000055770.1	plod1a-201	2714	730aa	ENSONIP00000050525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669CR83	-
ENSONIT00000058349.1	plod1a-205	2467	726aa	ENSONIP00000027819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669AXG2	-
ENSONIT00000043174.1	plod1a-207	2443	718aa	ENSONIP00000043948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669C874	-
ENSONIT00000053885.1	plod1a-202	2437	716aa	ENSONIP00000067656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669E9H8	-
ENSONIT00000022672.2	plod1a-204	2425	712aa	ENSONIP00000022652.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3KNF7	-
ENSONIT00000046171.1	plod1a-208	2389	700aa	ENSONIP00000081460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669F797	-
ENSONIT00000076201.1	plod1a-206	2368	693aa	ENSONIP00000045342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669CFK2	-
ENSONIT00000068936.1	plod1a-209	2365	692aa	ENSONIP00000059569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DG24	-
ENSONIT00000059336.1	plod1a-210	2335	682aa	ENSONIP00000036126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BKQ2	-

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Summary

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