Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: pabpc1l ENSONIG00000017314

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Description

poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]

Location

Primary_assembly LG20: 15,079,561-15,091,390 reverse strand.

O_niloticus_UMD_NMBU:CM007501.2

About this gene

This gene has 10 transcripts (splice variants), 216 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000085900.1	pabpc1l-201	2823	659aa	ENSONIP00000039123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BUS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000021855.2	pabpc1l-202	2724	626aa	ENSONIP00000021836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3KL41	-
ENSONIT00000092646.1	pabpc1l-204	1854	613aa	ENSONIP00000032588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BA29	-
ENSONIT00000072746.1	pabpc1l-205	1749	578aa	ENSONIP00000035096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BHV4	-
ENSONIT00000080840.1	pabpc1l-206	1734	573aa	ENSONIP00000048942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669CKW6	-
ENSONIT00000039612.1	pabpc1l-207	1704	563aa	ENSONIP00000061599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DLI6	-
ENSONIT00000052168.1	pabpc1l-208	1683	531aa	ENSONIP00000078942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669F2E7	-
ENSONIT00000054458.1	pabpc1l-203	1665	550aa	ENSONIP00000078729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669F483	-
ENSONIT00000048036.1	pabpc1l-209	1593	526aa	ENSONIP00000043889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669C8V0	-
ENSONIT00000077374.1	pabpc1l-210	1536	507aa	ENSONIP00000053692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669D1M0	-

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Summary

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