Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: synj1 ENSONIG00000004667

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Description

synaptojanin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9180]

Location

Primary_assembly LG10: 15,193,929-15,218,618 reverse strand.

O_niloticus_UMD_NMBU:CM007491.2

About this gene

This gene has 10 transcripts (splice variants), 217 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000046947.1	synj1-202	5088	1683aa	ENSONIP00000071251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669EJG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000077916.1	synj1-204	5676	1600aa	ENSONIP00000049184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669CS25	-
ENSONIT00000089378.1	synj1-205	5622	1582aa	ENSONIP00000061414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DL47	-
ENSONIT00000085276.1	synj1-203	5034	1665aa	ENSONIP00000035061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BHR7	-
ENSONIT00000040065.1	synj1-201	4620	1527aa	ENSONIP00000065363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DXW5	-
ENSONIT00000005881.2	synj1-206	4110	1357aa	ENSONIP00000005877.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JAI7	-
ENSONIT00000062518.1	synj1-208	3339	1100aa	ENSONIP00000046441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669CI25	-
ENSONIT00000044171.1	synj1-207	3330	1109aa	ENSONIP00000054061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669D0T1	-
ENSONIT00000085322.1	synj1-209	3099	1020aa	ENSONIP00000069760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669E9M5	-
ENSONIT00000051950.1	synj1-210	2994	997aa	ENSONIP00000071675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669EFE6	-

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Summary

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