Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: pabpc1a ENSONIG00000002717

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Description

poly A binding protein, cytoplasmic 1 b [Source:ZFIN;Acc:ZDB-GENE-050308-1]

Location

Primary_assembly LG22: 19,800,687-19,807,183 reverse strand.

O_niloticus_UMD_NMBU:CM007502.2

About this gene

This gene has 10 transcripts (splice variants), 199 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000076233.1	pabpc1a-202	1923	640aa	ENSONIP00000079543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669F903	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000003407.2	pabpc1a-203	1866	621aa	ENSONIP00000003406.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3J3G6	-
ENSONIT00000081401.1	pabpc1a-204	1815	604aa	ENSONIP00000057504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DF10	-
ENSONIT00000090062.1	pabpc1a-205	1812	603aa	ENSONIP00000058092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DBT7	-
ENSONIT00000054977.1	pabpc1a-206	1782	593aa	ENSONIP00000064580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DUR8	-
ENSONIT00000066251.1	pabpc1a-207	1734	577aa	ENSONIP00000074711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669EPC1	-
ENSONIT00000078238.1	pabpc1a-201	1719	572aa	ENSONIP00000042251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669C6K7	-
ENSONIT00000071129.1	pabpc1a-208	1689	562aa	ENSONIP00000043466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669C9B7	-
ENSONIT00000067303.1	pabpc1a-209	1263	420aa	ENSONIP00000044827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669CE46	-
ENSONIT00000087966.1	pabpc1a-210	618	196aa	ENSONIP00000069244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669ECI8	-

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Summary

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