Transcript: MGP_PahariEiJ_T0025430.1 Sema3f-201

Description

semaphorin 3F [Source:NCBI gene;Acc:110327483]

Location

Chromosome 10: 101,153,472-101,181,797 reverse strand.

About this transcript

This transcript has 18 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene MGP_PahariEiJ_G0015527.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0025431.1	Sema3f-202	2383	785aa	MGP_PahariEiJ_P0025431	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0025430.1	Sema3f-201	3379	754aa	MGP_PahariEiJ_P0025430	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0025438.1	Sema3f-209	906	284aa	MGP_PahariEiJ_P0025438	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0025440.1	Sema3f-211	685	191aa	MGP_PahariEiJ_P0025440	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0025441.1	Sema3f-212	443	147aa	MGP_PahariEiJ_P0025441	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0025433.1	Sema3f-204	2950	185aa	MGP_PahariEiJ_P0025433	Nonsense mediated decay	-
MGP_PahariEiJ_T0025434.1	Sema3f-205	711	115aa	MGP_PahariEiJ_P0025434	Nonsense mediated decay	-
MGP_PahariEiJ_T0025437.1	Sema3f-208	1034	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0025432.1	Sema3f-203	1066	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0025435.1	Sema3f-206	693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0025439.1	Sema3f-210	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0025436.1	Sema3f-207	375	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,379 bps, Translation length: 754 residues

Version

MGP_PahariEiJ_T0025430.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_PahariEiJ_T0025430.1 Sema3f-201

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Transcript: MGP_PahariEiJ_T0025430.1 Sema3f-201

Summary

About Us

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