Transcript: MGP_PahariEiJ_T0050342.1 Ptcd3-202

Description

pentatricopeptide repeat domain 3 [Source:NCBI gene;Acc:110316412]

Location

Chromosome 2: 89,820,055-89,850,321 reverse strand.

About this transcript

This transcript has 24 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene MGP_PahariEiJ_G0022229.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0050342.1	Ptcd3-202	2720	686aa	MGP_PahariEiJ_P0050342	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0050343.1	Ptcd3-203	2627	284aa	MGP_PahariEiJ_P0050343	Nonsense mediated decay	-
MGP_PahariEiJ_T0050346.1	Ptcd3-206	588	50aa	MGP_PahariEiJ_P0050346	Nonsense mediated decay	-
MGP_PahariEiJ_T0050349.1	Ptcd3-209	545	58aa	MGP_PahariEiJ_P0050349	Nonsense mediated decay	-
MGP_PahariEiJ_T0050345.1	Ptcd3-205	2449	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050344.1	Ptcd3-204	2297	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050341.1	Ptcd3-201	1109	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050347.1	Ptcd3-207	968	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050348.1	Ptcd3-208	774	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050350.1	Ptcd3-210	321	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 2,720 bps, Translation length: 686 residues

Version

MGP_PahariEiJ_T0050342.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_PahariEiJ_T0050342.1 Ptcd3-202

Summary

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Transcript: MGP_PahariEiJ_T0050342.1 Ptcd3-202

Summary

About Us

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