Transcript: MGP_PahariEiJ_T0023842.1 Lrrc49-207

Description

leucine rich repeat containing 49 [Source:NCBI gene;Acc:110327305]

Location

Chromosome 10: 55,527,860-55,606,980 reverse strand.

About this transcript

This transcript has 10 exons.

Gene

This transcript is a product of gene MGP_PahariEiJ_G0015179.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0023838.1	Lrrc49-203	3014	752aa	MGP_PahariEiJ_P0023838	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0023839.1	Lrrc49-204	2770	746aa	MGP_PahariEiJ_P0023839	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0023840.1	Lrrc49-205	2572	680aa	MGP_PahariEiJ_P0023840	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0023837.1	Lrrc49-202	2512	686aa	MGP_PahariEiJ_P0023837	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0023844.1	Lrrc49-209	596	122aa	MGP_PahariEiJ_P0023844	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0023836.1	Lrrc49-201	4188	362aa	MGP_PahariEiJ_P0023836	Nonsense mediated decay	-
MGP_PahariEiJ_T0023843.1	Lrrc49-208	711	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0023842.1	Lrrc49-207	1705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0023841.1	Lrrc49-206	724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,705 bps,

Version

MGP_PahariEiJ_T0023842.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_PahariEiJ_T0023842.1 Lrrc49-207

Summary

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Transcript: MGP_PahariEiJ_T0023842.1 Lrrc49-207

Summary

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