Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Lgr5 MGP_PahariEiJ_G0031271

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Description

leucine rich repeat containing G protein-coupled receptor 5 [Source:NCBI gene;Acc:110326108]

Location

Chromosome 9: 60,866,693-60,990,704 forward strand.

PAHARI_EIJ_v1.1:LT608291.1

About this gene

This gene has 7 transcripts (splice variants), 200 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0087887.1	Lgr5-201	4448	883aa	MGP_PahariEiJ_P0087887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0087891.1	Lgr5-205	2580	859aa	MGP_PahariEiJ_P0087891	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0087892.1	Lgr5-206	2436	811aa	MGP_PahariEiJ_P0087892	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0087890.1	Lgr5-204	606	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0087888.1	Lgr5-202	3948	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0087889.1	Lgr5-203	2784	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0087894.1	Lgr5-207	497	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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