Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pum1 MGP_PahariEiJ_G0028881

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Description

pumilio RNA binding family member 1 [Source:NCBI gene;Acc:110323936]

Location

Chromosome 6: 81,541,794-81,659,256 forward strand.

PAHARI_EIJ_v1.1:LT608307.1

About this gene

This gene has 7 transcripts (splice variants), 219 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0079835.1	Pum1-201	5434	1189aa	MGP_PahariEiJ_P0079835	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0079837.1	Pum1-203	5103	1092aa	MGP_PahariEiJ_P0079837	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0079836.1	Pum1-202	4659	944aa	MGP_PahariEiJ_P0079836	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0079840.1	Pum1-206	4020	1186aa	MGP_PahariEiJ_P0079840	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0079841.1	Pum1-207	3993	1188aa	MGP_PahariEiJ_P0079841	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0079839.1	Pum1-205	693	218aa	MGP_PahariEiJ_P0079839	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0079838.1	Pum1-204	1263	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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