Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Sema4c MGP_PahariEiJ_G0027287

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Description

semaphorin 4C [Source:NCBI gene;Acc:110321787]

Location

Chromosome 5: 17,181,654-17,191,465 reverse strand.

PAHARI_EIJ_v1.1:LT608292.1

About this gene

This gene has 8 transcripts (splice variants), 199 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0072483.1	Sema4c-202	4159	834aa	MGP_PahariEiJ_P0072483	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0072482.1	Sema4c-201	3773	834aa	MGP_PahariEiJ_P0072482	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0072485.1	Sema4c-204	3767	834aa	MGP_PahariEiJ_P0072485	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0072484.1	Sema4c-203	3644	834aa	MGP_PahariEiJ_P0072484	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0072489.1	Sema4c-208	495	36aa	MGP_PahariEiJ_P0072489	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0072488.1	Sema4c-207	448	37aa	MGP_PahariEiJ_P0072488	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0072486.1	Sema4c-205	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0072487.1	Sema4c-206	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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