Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pdpk1 MGP_PahariEiJ_G0023489

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Description

3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:110337888]

Location

Chromosome 21: 19,025,353-19,100,735 reverse strand.

PAHARI_EIJ_v1.1:LT608306.1

About this gene

This gene has 10 transcripts (splice variants), 240 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0055295.1	Pdpk1-201	7197	559aa	MGP_PahariEiJ_P0055295	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0055297.1	Pdpk1-203	4656	432aa	MGP_PahariEiJ_P0055297	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0055299.1	Pdpk1-205	1832	532aa	MGP_PahariEiJ_P0055299	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0055298.1	Pdpk1-204	1730	457aa	MGP_PahariEiJ_P0055298	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0055296.1	Pdpk1-202	1724	522aa	MGP_PahariEiJ_P0055296	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0055303.1	Pdpk1-209	504	128aa	MGP_PahariEiJ_P0055303	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0055304.1	Pdpk1-210	328	56aa	MGP_PahariEiJ_P0055304	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0055301.1	Pdpk1-207	691	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0055300.1	Pdpk1-206	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0055302.1	Pdpk1-208	3470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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