Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
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External references
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ID History
- Gene history

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Gene: Fanca MGP_PahariEiJ_G0023284

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Description

FA complementation group A [Source:NCBI gene;Acc:110337311]

Location

Chromosome 20: 46,435,830-46,490,255 reverse strand.

PAHARI_EIJ_v1.1:LT608293.1

About this gene

This gene has 9 transcripts (splice variants) and 174 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0054705.1	Fanca-201	4533	1455aa	MGP_PahariEiJ_P0054705	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0054711.1	Fanca-207	2367	775aa	MGP_PahariEiJ_P0054711	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0054708.1	Fanca-204	781	189aa	MGP_PahariEiJ_P0054708	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0054709.1	Fanca-205	486	146aa	MGP_PahariEiJ_P0054709	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0054707.1	Fanca-203	669	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0054710.1	Fanca-206	3004	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0054713.1	Fanca-209	890	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0054712.1	Fanca-208	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0054706.1	Fanca-202	4506	1501aa	MGP_PahariEiJ_P0054706	Unknown likely coding	-

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Summary

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