Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rho MGP_PahariEiJ_G0022513

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Description

rhodopsin [Source:NCBI gene;Acc:110316575]

Location

Chromosome 2: 131,628,287-131,636,536 forward strand.

PAHARI_EIJ_v1.1:LT608286.1

About this gene

This gene has 7 transcripts (splice variants), 269 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0051811.1	Rho-201	4625	348aa	MGP_PahariEiJ_P0051811	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0051814.1	Rho-204	1051	209aa	MGP_PahariEiJ_P0051814	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0051813.1	Rho-203	840	203aa	MGP_PahariEiJ_P0051813	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0051815.1	Rho-205	874	51aa	MGP_PahariEiJ_P0051815	Nonsense mediated decay	-
MGP_PahariEiJ_T0051816.1	Rho-206	1174	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0051817.1	Rho-207	911	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0051812.1	Rho-202	683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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