Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Chmp3 MGP_PahariEiJ_G0022224

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Description

charged multivesicular body protein 3 [Source:NCBI gene;Acc:110315453]

Location

Chromosome 2: 89,476,651-89,521,729 forward strand.

PAHARI_EIJ_v1.1:LT608286.1

About this gene

This gene has 6 transcripts (splice variants), 213 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0050307.1	Chmp3-202	2586	224aa	MGP_PahariEiJ_P0050307	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0050308.1	Chmp3-203	350	96aa	MGP_PahariEiJ_P0050308	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0050309.1	Chmp3-204	356	41aa	MGP_PahariEiJ_P0050309	Nonsense mediated decay	-
MGP_PahariEiJ_T0050306.1	Chmp3-201	387	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0050310.1	Chmp3-205	347	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0050311.1	Chmp3-206	415	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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