Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pus7 MGP_PahariEiJ_G0021771

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Description

pseudouridine synthase 7 [Source:NCBI gene;Acc:110316428]

Location

Chromosome 2: 18,242,400-18,284,754 reverse strand.

PAHARI_EIJ_v1.1:LT608286.1

About this gene

This gene has 8 transcripts (splice variants), 205 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0048320.1	Pus7-202	3255	667aa	MGP_PahariEiJ_P0048320	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0048321.1	Pus7-203	3687	661aa	MGP_PahariEiJ_P0048321	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0048319.1	Pus7-201	3406	661aa	MGP_PahariEiJ_P0048319	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0048323.1	Pus7-205	888	184aa	MGP_PahariEiJ_P0048323	Nonsense mediated decay	-
MGP_PahariEiJ_T0048325.1	Pus7-207	949	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0048322.1	Pus7-204	772	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0048324.1	Pus7-206	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0048326.1	Pus7-208	2881	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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