Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Zeb1 MGP_PahariEiJ_G0018711

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Description

zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:110333013]

Location

Chromosome 15: 2,195,289-2,365,118 forward strand.

PAHARI_EIJ_v1.1:LT608295.1

About this gene

This gene has 11 transcripts (splice variants), 279 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0038564.1	Zeb1-201	5805	1111aa	MGP_PahariEiJ_P0038564	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0038566.1	Zeb1-203	853	283aa	MGP_PahariEiJ_P0038566	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0038570.1	Zeb1-207	773	154aa	MGP_PahariEiJ_P0038570	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0038568.1	Zeb1-205	1387	78aa	MGP_PahariEiJ_P0038568	Nonsense mediated decay	-
MGP_PahariEiJ_T0038567.1	Zeb1-204	1189	10aa	MGP_PahariEiJ_P0038567	Nonsense mediated decay	-
MGP_PahariEiJ_T0038574.1	Zeb1-211	2662	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0038573.1	Zeb1-210	1544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0038569.1	Zeb1-206	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0038571.1	Zeb1-208	768	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0038572.1	Zeb1-209	2462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0038565.1	Zeb1-202	1859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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