Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Zfr MGP_PahariEiJ_G0016057

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Description

zinc finger RNA binding protein [Source:NCBI gene;Acc:110329176]

Location

Chromosome 11: 58,579,947-58,645,135 forward strand.

PAHARI_EIJ_v1.1:LT608304.1

About this gene

This gene has 9 transcripts (splice variants), 247 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0027395.1	Zfr-201	4839	1074aa	MGP_PahariEiJ_P0027395	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0027400.1	Zfr-206	897	298aa	MGP_PahariEiJ_P0027400	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027396.1	Zfr-202	812	247aa	MGP_PahariEiJ_P0027396	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027397.1	Zfr-203	633	193aa	MGP_PahariEiJ_P0027397	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027401.1	Zfr-207	932	43aa	MGP_PahariEiJ_P0027401	Nonsense mediated decay	-
MGP_PahariEiJ_T0027399.1	Zfr-205	565	114aa	MGP_PahariEiJ_P0027399	Nonsense mediated decay	-
MGP_PahariEiJ_T0027403.1	Zfr-209	857	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0027398.1	Zfr-204	517	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0027402.1	Zfr-208	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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