Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nphs1 MGP_PahariEiJ_G0012756

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Description

NPHS1 adhesion molecule, nephrin [Source:NCBI gene;Acc:110327198]

Location

Chromosome 1: 3,405,711-3,433,687 forward strand.

PAHARI_EIJ_v1.1:LT608296.1

About this gene

This gene has 5 transcripts (splice variants), 179 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0015549.1	Nphs1-202	4596	1256aa	MGP_PahariEiJ_P0015549	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0015548.1	Nphs1-201	656	167aa	MGP_PahariEiJ_P0015548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0015551.1	Nphs1-204	752	71aa	MGP_PahariEiJ_P0015551	Nonsense mediated decay	-
MGP_PahariEiJ_T0015550.1	Nphs1-203	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0015552.1	Nphs1-205	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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