Mouse (GRCm39)
Description

tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:MGI Symbol;Acc:MGI:1919276]

Gene Synonyms

1110005N20Rik, 1600025P05Rik, Trmt1

Location
About this transcript

This transcript has 11 exons, is annotated with 12 domains and features, is associated with 1544 variant alleles and maps to 193 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000023019.12Trmu-2011526417aaENSMUSP00000023019.6
 
Protein coding
CCDS27726Q9DAT5 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000162339.8Trmu-20766558aaENSMUSP00000125266.2
 
Nonsense mediated decay
F7CNH0 TSL:5CDS 5' incomplete
ENSMUST00000162491.8Trmu-20846899aaENSMUSP00000125704.2
 
Nonsense mediated decay
E0CZ49 TSL:3
ENSMUST00000162010.8Trmu-206774No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000160733.2Trmu-204314No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000159730.2Trmu-2032077No protein-
 
Retained intron
-TSL:1
ENSMUST00000159362.2Trmu-202869No protein-
 
Retained intron
-TSL:5
ENSMUST00000161784.2Trmu-205814No protein-
 
Retained intron
-TSL:3
ENSMUST00000162601.2Trmu-209743No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,526 bps, Translation length: 417 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9DAT5

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27726

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000023019.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.