Description

TAR DNA binding protein [Source:MGI Symbol;Acc:MGI:2387629]

Synonyms

Tdp43, 1190002A23Rik, TDP-43

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 10 variations and maps to 140 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Tardbp-202ENSMUST00000084125.97477414aaENSMUSP00000081142
 
Protein coding
CCDS38971Q544R5 Q921F2 NM_001305425
NM_145556
NP_001292354
NP_663531
NR_131120
TSL:1GENCODE basicAPPRIS P1
Tardbp-210ENSMUST00000172073.76513304aaENSMUSP00000130963
 
Protein coding
CCDS38968Q6VYI4 NM_001008545
NP_001008545
TSL:5GENCODE basic
Tardbp-209ENSMUST00000165113.76495298aaENSMUSP00000129342
 
Protein coding
CCDS38969Q8BLD4 NM_001003898
NM_001003899
NP_001003898
NP_001003899
NR_027864
TSL:5GENCODE basic
Tardbp-206ENSMUST00000105702.86425302aaENSMUSP00000101327
 
Protein coding
CCDS38967Q6VYI5 NM_001008546
NP_001008546
TSL:5GENCODE basic
Tardbp-204ENSMUST00000105699.71904295aaENSMUSP00000101324
 
Protein coding
CCDS38970Q8R0B4 -TSL:1GENCODE basic
Tardbp-223ENSMUST00000189048.61096298aaENSMUSP00000140364
 
Protein coding
CCDS38969Q8BLD4 -TSL:1GENCODE basic
Tardbp-203ENSMUST00000095719.91011304aaENSMUSP00000093386
 
Protein coding
CCDS38968Q6VYI4 -TSL:1GENCODE basic
Tardbp-205ENSMUST00000105700.7923302aaENSMUSP00000101325
 
Protein coding
CCDS38967Q6VYI5 -TSL:1GENCODE basic
Tardbp-216ENSMUST00000186947.6818243aaENSMUSP00000140529
 
Protein coding
-A0A087WR97 -CDS 3' incompleteTSL:5
Tardbp-214ENSMUST00000186711.181419aaENSMUSP00000140057
 
Protein coding
-A0A087WQ63 -CDS 5' incompleteTSL:3
Tardbp-227ENSMUST00000190630.674885aaENSMUSP00000140385
 
Protein coding
-A0A087WQX8 -CDS 5' incompleteTSL:2
Tardbp-211ENSMUST00000185673.1740149aaENSMUSP00000141010
 
Protein coding
-A0A087WSE4 -CDS 3' incompleteTSL:5
Tardbp-212ENSMUST00000185824.6709200aaENSMUSP00000140110
 
Protein coding
-A0A087WQA5 -CDS 5' incompleteTSL:5
Tardbp-218ENSMUST00000187939.6570128aaENSMUSP00000140928
 
Protein coding
-A0A087WS74 -CDS 5' incompleteTSL:5
Tardbp-221ENSMUST00000188488.152999aaENSMUSP00000140989
 
Protein coding
-A0A087WSC6 -CDS 5' incompleteTSL:5
Tardbp-201ENSMUST00000045180.132006298aaENSMUSP00000038113
 
Nonsense mediated decay
CCDS38969Q8BLD4 -TSL:1
Tardbp-219ENSMUST00000188134.61773298aaENSMUSP00000139476
 
Nonsense mediated decay
CCDS38969Q8BLD4 -TSL:5
Tardbp-228ENSMUST00000190696.6141184aaENSMUSP00000139637
 
Nonsense mediated decay
-A0A087WP57 -TSL:5
Tardbp-230ENSMUST00000191450.61304285aaENSMUSP00000140832
 
Nonsense mediated decay
-A0A087WRZ5 -TSL:5
Tardbp-208ENSMUST00000147391.2101135aaENSMUSP00000140333
 
Nonsense mediated decay
-A0A087WQT4 -CDS 5' incompleteTSL:2
Tardbp-207ENSMUST00000140897.7781140aaENSMUSP00000135135
 
Nonsense mediated decay
-H3BJV1 -CDS 5' incompleteTSL:5
Tardbp-226ENSMUST00000190552.6741175aaENSMUSP00000141052
 
Nonsense mediated decay
-A0A087WSH7 -CDS 5' incompleteTSL:5
Tardbp-229ENSMUST00000191378.6684138aaENSMUSP00000140718
 
Nonsense mediated decay
-A0A087WRP4 -CDS 5' incompleteTSL:5
Tardbp-215ENSMUST00000186729.667688aaENSMUSP00000139547
 
Nonsense mediated decay
-A0A087WNY6 -CDS 5' incompleteTSL:5
Tardbp-224ENSMUST00000190287.151778aaENSMUSP00000140859
 
Nonsense mediated decay
-A0A087WS17 -CDS 5' incompleteTSL:5
Tardbp-222ENSMUST00000189041.1908No protein-
 
Processed transcript
---TSL:5
Tardbp-220ENSMUST00000188380.1731No protein-
 
Processed transcript
---TSL:5
Tardbp-217ENSMUST00000187937.1629No protein-
 
Processed transcript
---TSL:5
Tardbp-213ENSMUST00000186317.1358No protein-
 
Processed transcript
---TSL:5
Tardbp-225ENSMUST00000190478.1370No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,011 bps, Translation length: 304 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38968

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000095719.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays