Description

whirlin [Source:MGI Symbol;Acc:MGI:2682003]

Synonyms

Ush2d, 1110035G07Rik, Dfnb31, wi, C430046P22Rik

Location
About this transcript

This transcript has 12 exons, is annotated with 22 domains and features, is associated with 39 variations and maps to 264 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Whrn-203ENSMUST00000084510.74049918aaENSMUSP00000081557
 
Protein coding
CCDS18255Q80VW5 NM_001008791
NP_001008791
TSL:1GENCODE basicAPPRIS P4
Whrn-207ENSMUST00000107393.74028911aaENSMUSP00000103016
 
Protein coding
CCDS38778Q80VW5 NM_001008792
NP_001008792
TSL:1GENCODE basicAPPRIS ALT2
Whrn-201ENSMUST00000063650.94016907aaENSMUSP00000069664
 
Protein coding
CCDS18257Q80VW5 NM_028640
NP_082916
TSL:1GENCODE basicAPPRIS ALT2
Whrn-206ENSMUST00000102867.74013906aaENSMUSP00000099931
 
Protein coding
CCDS18256Q80VW5 NM_001008793
NP_001008793
TSL:1GENCODE basicAPPRIS ALT2
Whrn-202ENSMUST00000063672.92804571aaENSMUSP00000065838
 
Protein coding
-Q80VW5 -TSL:1GENCODE basic
Whrn-205ENSMUST00000095038.72665476aaENSMUSP00000092648
 
Protein coding
-Q80VW5 -TSL:1GENCODE basic
Whrn-208ENSMUST00000119294.72632465aaENSMUSP00000114030
 
Protein coding
-Q80VW5 -TSL:1GENCODE basic
Whrn-204ENSMUST00000095037.12419404aaENSMUSP00000092647
 
Protein coding
-Q80VW5 -TSL:1GENCODE basic
Whrn-210ENSMUST00000133425.1797164aaENSMUSP00000119280
 
Protein coding
-I7HNW6 NM_001276371
NP_001263300
CDS 5' incompleteTSL:1
Whrn-212ENSMUST00000144965.759074aaENSMUSP00000121944
 
Protein coding
-F6RBK9 -CDS 5' incompleteTSL:3
Whrn-214ENSMUST00000145630.732328aaENSMUSP00000116387
 
Nonsense mediated decay
-F7BB17 -CDS 5' incompleteTSL:1
Whrn-209ENSMUST00000124016.72741No protein-
 
Processed transcript
---TSL:5
Whrn-215ENSMUST00000148957.1510No protein-
 
Processed transcript
---TSL:1
Whrn-213ENSMUST00000145133.72869No protein-
 
Retained intron
---TSL:1
Whrn-217ENSMUST00000155058.72537No protein-
 
Retained intron
---TSL:1
Whrn-211ENSMUST00000140720.1872No protein-
 
Retained intron
---TSL:3
Whrn-216ENSMUST00000153307.1783No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 12, Coding exons: 12, Transcript length: 4,013 bps, Translation length: 906 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS18256

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80VW5

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000102867.7

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays