Description

ATRX, chromatin remodeler [Source:MGI Symbol;Acc:MGI:103067]

Synonyms

4833408C14Rik, alpha thalassemia/mental retardation syndrome X-linked, Hp1bp2, Xnp, HP1-BP38, DXHXS6677E, Rad54, XH2

About this transcript

This transcript has 35 exons, is annotated with 62 domains and features, is associated with 68 variations and maps to 568 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Atrx-202ENSMUST00000113573.7102752476aaENSMUSP00000109203
 
Protein coding
CCDS41095Q61687 NM_009530
NP_033556
TSL:1GENCODE basicAPPRIS P1
Atrx-206ENSMUST00000128968.73233995aaENSMUSP00000121416
 
Protein coding
-F6RDB7 -CDS 3' incompleteTSL:5
Atrx-227ENSMUST00000200471.13124334aaENSMUSP00000143280
 
Protein coding
-A0A0G2JFR8 -CDS 5' incompleteTSL:3
Atrx-201ENSMUST00000101305.82903181aaENSMUSP00000098863
 
Protein coding
-Q3TA30 -TSL:1GENCODE basic
Atrx-217ENSMUST00000150914.71920385aaENSMUSP00000122034
 
Protein coding
-Q8C2S3 -CDS 3' incompleteTSL:1
Atrx-224ENSMUST00000198448.41835520aaENSMUSP00000143090
 
Protein coding
-A0A0G2JFA5 -CDS 3' incompleteTSL:5
Atrx-210ENSMUST00000134507.71716347aaENSMUSP00000123085
 
Protein coding
-Q3UY26 -CDS 3' incompleteTSL:1
Atrx-222ENSMUST00000198209.11579526aaENSMUSP00000142726
 
Protein coding
-A0A0G2JED2 -CDS 5' and 3' incompleteTSL:5
Atrx-209ENSMUST00000134381.71155238aaENSMUSP00000122875
 
Protein coding
-A6PWK8 -CDS 3' incompleteTSL:3
Atrx-218ENSMUST00000154866.7916208aaENSMUSP00000121291
 
Protein coding
-A6PWK7 -CDS 3' incompleteTSL:5
Atrx-226ENSMUST00000199233.4754158aaENSMUSP00000143015
 
Protein coding
-A0A0G2JF42 -CDS 3' incompleteTSL:5
Atrx-207ENSMUST00000130980.172061aaENSMUSP00000117528
 
Protein coding
-A6PWL2 -CDS 3' incompleteTSL:5
Atrx-211ENSMUST00000137453.764489aaENSMUSP00000120246
 
Protein coding
-A6PWK9 -CDS 3' incompleteTSL:3
Atrx-223ENSMUST00000198441.4642174aaENSMUSP00000143565
 
Protein coding
-A0A0G2JGH3 -CDS 3' incompleteTSL:5
Atrx-205ENSMUST00000127221.766212aaENSMUSP00000143664
 
Nonsense mediated decay
-A0A0G2JGR1 -CDS 5' incompleteTSL:3
Atrx-225ENSMUST00000198567.166078aaENSMUSP00000143007
 
Nonsense mediated decay
-A0A0G2JF35 -CDS 5' incompleteTSL:3
Atrx-221ENSMUST00000197302.4490135aaENSMUSP00000143163
 
Nonsense mediated decay
-A0A0G2JFG6 -CDS 5' incompleteTSL:5
Atrx-213ENSMUST00000141609.1735No protein-
 
Processed transcript
---TSL:3
Atrx-204ENSMUST00000126345.2520No protein-
 
Processed transcript
---TSL:3
Atrx-220ENSMUST00000196998.15431No protein-
 
Retained intron
---TSL:NA
Atrx-203ENSMUST00000123174.11838No protein-
 
Retained intron
---TSL:1
Atrx-219ENSMUST00000155445.5942No protein-
 
Retained intron
---TSL:3
Atrx-214ENSMUST00000142235.1771No protein-
 
Retained intron
---TSL:3
Atrx-215ENSMUST00000143361.1743No protein-
 
Retained intron
---TSL:2
Atrx-216ENSMUST00000146193.2691No protein-
 
Retained intron
---TSL:3
Atrx-208ENSMUST00000133543.1545No protein-
 
Retained intron
---TSL:3
Atrx-212ENSMUST00000138765.1468No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 35, Coding exons: 35, Transcript length: 10,275 bps, Translation length: 2,476 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS41095

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61687

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000113573.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays