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Description

SAM domain and HD domain, 1 [Source:MGI Symbol;Acc:MGI:1927468]

Synonyms

E330031J07Rik

About this transcript

This transcript has 16 exons, is annotated with 16 domains and features, is associated with 29 variations and maps to 319 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Samhd1-201ENSMUST00000057725.93926658aaENSMUSP00000059717
 
Protein coding
CCDS16973F8WJE0 NM_018851
NP_061339
TSL:1GENCODE basicAPPRIS P3
Samhd1-202ENSMUST00000088523.101996651aaENSMUSP00000085880
 
Protein coding
CCDS50783E9Q0K6 NM_001139520
NP_001132992
TSL:5GENCODE basicAPPRIS ALT2
Samhd1-203ENSMUST00000109549.23245582aaENSMUSP00000105176
 
Protein coding
-E9PYG9 -TSL:1GENCODE basicAPPRIS ALT2
Samhd1-206ENSMUST00000139263.72036631aaENSMUSP00000124935
 
Protein coding
-F6TVP2 -CDS 5' incompleteTSL:1
Samhd1-204ENSMUST00000123932.73753150aaENSMUSP00000124599
 
Nonsense mediated decay
-E0CXZ5 -TSL:2
Samhd1-208ENSMUST00000149313.71375No protein-
 
Retained intron
---TSL:1
Samhd1-210ENSMUST00000160213.1681No protein-
 
Retained intron
---TSL:3
Samhd1-205ENSMUST00000139149.1678No protein-
 
Retained intron
---TSL:2
Samhd1-209ENSMUST00000152866.1542No protein-
 
Retained intron
---TSL:2
Samhd1-207ENSMUST00000142508.1473No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,926 bps, Translation length: 658 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16973

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000057725.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays