Transcript: ENSMUST00000027431.7 Htr2b-201

Description

5-hydroxytryptamine (serotonin) receptor 2B [Source:MGI Symbol;Acc:MGI:109323]

Gene Synonyms

5-HT2B

Location

Chromosome 1: 86,026,748-86,039,692 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 36 domains and features, is associated with 912 variant alleles and maps to 192 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000026228.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000027431.7	Htr2b-201	2083	479aa	ENSMUSP00000027431.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35644	Q02152	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000155077.2	Htr2b-202	520	173aa	ENSMUSP00000116273.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3UVT8	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,083 bps, Translation length: 479 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q02152

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35644

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000027431.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000027431.7 Htr2b-201

Summary

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Transcript: ENSMUST00000027431.7 Htr2b-201

Summary

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