Transcript: Pmaip1-201 ENSMUST00000025399.7

Description

phorbol-12-myristate-13-acetate-induced protein 1 [Source:MGI Symbol;Acc:MGI:1930146]

Synonyms

Noxa

Location

Chromosome 18: 66,458,604-66,465,550 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 4 variations and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024521 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	RefSeq	Flags
Pmaip1-201	ENSMUST00000025399.7	2646	103aa	ENSMUSP00000025399	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29315	Q9JM54	NM_021451 NP_067426	<p>Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&c=chr14&o=94517268&t=94547548&g=wgEncodeGencodeCompV19&i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:1The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic<p>PRINCIPAL1 - APPRIS candidate principal isoform.</p><p><a class="popup" href="/Homo_sapiens/Help/Glossary?id=521">APPRIS</a> is a system to annotate alternatively spliced transcripts based on a range of computational methods.</p>APPRIS P1

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,646 bps, Translation length: 103 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29315

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JM54

Transcript Support Level (TSL)

<p>Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&c=chr14&o=94517268&t=94547548&g=wgEncodeGencodeCompV19&i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:1

Version

ENSMUST00000025399.7

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: Pmaip1-201 ENSMUST00000025399.7

Summary

Transcript-based displays

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: Pmaip1-201 ENSMUST00000025399.7

Summary

Transcript-based displays

About Us

Get help

Our sister sites

Follow us