Transcript: ENSMUST00000238733.2 Tmem200b-202

Description

transmembrane protein 200B [Source:MGI Symbol;Acc:MGI:3646343]

Gene Synonyms

EG623230

Location

Chromosome 4: 131,648,511-131,649,936 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 13 domains and features, is associated with 469 variant alleles and maps to 64 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000070720.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000094666.4	Tmem200b-201	1370	284aa	ENSMUSP00000092253.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51316	D3Z0P8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000238733.2	Tmem200b-202	961	284aa	ENSMUSP00000158757.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51316	D3Z0P8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 961 bps, Translation length: 284 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51316

Version

ENSMUST00000238733.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000238733.2 Tmem200b-202

Summary

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Transcript: ENSMUST00000238733.2 Tmem200b-202

Summary

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