Transcript: ENSMUST00000238328.2 Gm21586-202

Description

predicted gene, 21586 [Source:MGI Symbol;Acc:MGI:5434941]

Location

Chromosome 4: 42,438,970-42,439,970 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 1 variant allele and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000095234.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000238328.2	Gm21586-202	378	87aa	ENSMUSP00000158759.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57273	A2APU9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000107988.4	Gm21586-201	264	87aa	ENSMUSP00000103622.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57273	A2APU9	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 378 bps, Translation length: 87 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57273

Version

ENSMUST00000238328.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000238328.2 Gm21586-202

Summary

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Transcript: ENSMUST00000238328.2 Gm21586-202

Summary

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